BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E10LP1|AL425141
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig507 1161 0.0
3x_Contig1544 398 e-110
>3x_Contig507
Length = 1662
Score = 1161 bits (584), Expect = 0.0
Identities = 595/598 (99%), Gaps = 1/598 (0%)
Strand = Plus / Plus
Query: 8 aatagtctaatttttacagatgagtgttaagaagcaaagttccaagtcttcagtgccaaa 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 aatagtctaatttttacagatgagtgttaagaagcaaagttccaagtcttcagtgccaaa 1111
Query: 68 attgacgaagaaagatgacaaaaaggtaaaatcatcgtcaagtggttcagagtctagttc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 attgacgaagaaagatgacaaaaaggtaaaatcatcgtcaagtggttcagagtctagttc 1171
Query: 128 caattccagcgacas-tcgagttcaggttcaggttcaggttcaggttcaggttcagattc 186
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 caattccagcgacagctcgagttcaggttcaggttcaggttcaggttcaggttcagattc 1231
Query: 187 ggattcggattctggctcagactctagttcaagctctagctcagattcagaatcgaactc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 ggattcggattctggctcagactctagttcaagctctagctcagattcagaatcgaactc 1291
Query: 247 tgatagtagctccagttccagttccagttccagttccagttccagttcagactcagactc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 tgatagtagctccagttccagttccagttccagttccagttccagttcagactcagactc 1351
Query: 307 cagttcagactcagattctagttccagctcagactctagttccagctcagactctgattc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1352 cagttcagactcagattctagttccagctcagactctagttccagctcagactctgattc 1411
Query: 367 cgactcagactctagctccagtgccagctcagaatccgatgatgaggacgaaaaagacat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 cgactcagactctagctccagtgccagctcagaatccgatgatgaggacgaaaaagacat 1471
Query: 427 caaaattaagataaaagatgaaaaatctgagccagttgcagtggaagtaaaggtgtcgaa 486
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1472 caaaattaagataaaagatgaaaaatctgagccagtagcagtggaagtaaaggtgtcgaa 1531
Query: 487 atcgtcaaactcggactcggaatctagttctgattctagctccgattcagactctagctc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1532 atcgtcaaactcggactcggaatctagttctgattctagctccgattcagactctagctc 1591
Query: 547 cgattcaagctctgactcagactccgattcaaactctagctctagctctagttcagat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1592 cgattcaagctctgactcagactccgattcaaactctagctctagctctagttcagat 1649
>3x_Contig1544
Length = 10626
Score = 398 bits (200), Expect = e-110
Identities = 208/210 (99%), Gaps = 1/210 (0%)
Strand = Plus / Plus
Query: 775 cgaaaccaacagcaaacgtcctcttgaaactgaatctgattccactgaaaattccaaaga 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cgaaaccaacagcaaacgtcctcttgaaactgaatctgattccactgaaaattccaaaga 71
Query: 835 atcatcacaagaaccttcaacaaagaaacaaatgatttcagctggcgttgatgaagtatt 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atcatcacaagaaccttcaacaaagaaacaaatgatttcagctggcgttgatgaagtatt 131
Query: 895 gcctggacaaagaaaacatttctccagagtcgaaagagagaagattgcatttgaacacg- 953
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcctggacaaagaaaacatttctccagagtcgaaagagagaagattgcatttgaacacga 191
Query: 954 agtcctgacagataatacatacaaaggkgc 983
||||||||||||||||||||||||||| ||
Sbjct: 192 agtcctgacagataatacatacaaaggtgc 221
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7376
Number of Sequences: 1807
Number of extensions: 7376
Number of successful extensions: 152
Number of sequences better than 1.0e-20: 2
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)